David J. States

	2009
32		Jing Gao, Alexander S. Ade, V. Glenn Tarcea, Terry E. Weymouth, Barbara R. Mirel, H. V. Jagadish, David J. States: Integrating and annotating the interactome using the MiMI plugin for cytoscape. Bioinformatics 25(1): 137-138 (2009)
31		Junguk Hur, Adam D. Schuyler, David J. States, Eva L. Feldman: SciMiner: web-based literature mining tool for target identification and functional enrichment analysis. Bioinformatics 25(6): 838-840 (2009)
30		David J. States, Alexander S. Ade, Zachary C. Wright, Aaron V. Bookvich, Brian D. Athey: MiSearch adaptive pubMed search tool. Bioinformatics 25(7): 974-976 (2009)
29		V. Glenn Tarcea, Terry E. Weymouth, Alexander S. Ade, Aaron V. Bookvich, Jing Gao, Vasudeva Mahavisno, Zach Wright, Adriane Chapman, Magesh Jayapandian, Arzucan Özgür, Yuanyuan Tian, Jim Cavalcoli, Barbara Mirel, Jignesh M. Patel, Dragomir R. Radev, Brian D. Athey, David J. States, H. V. Jagadish: Michigan molecular interactions r2: from interacting proteins to pathways. Nucleic Acids Research 37(Database-Issue): 642-646 (2009)
	2008
28		Maital Ashkenazi, Gary D. Bader, Allan Kuchinsky, Menachem Moshelion, David J. States: Cytoscape ESP: simple search of complex biological networks. Bioinformatics 24(12): 1465-1466 (2008)
27		Sirarat Sarntivijai, Alexander S. Ade, Brian D. Athey, David J. States: A bioinformatics analysis of the cell line nomenclature. Bioinformatics 24(23): 2760-2766 (2008)
26		Arvind Rao, Alfred O. Hero III, David J. States, James Douglas Engel: Using Directed Information to Build Biologically Relevant Influence Networks. J. Bioinformatics and Computational Biology 6(3): 493-519 (2008)
25		Aaron Elkiss, Siwei Shen, Anthony Fader, Günes Erkan, David J. States, Dragomir R. Radev: Blind men and elephants: What do citation summaries tell us about a research article? JASIST 59(1): 51-62 (2008)
	2007
24		Yuanyuan Tian, Richard C. McEachin, Carlos Santos, David J. States, Jignesh M. Patel: SAGA: a subgraph matching tool for biological graphs. Bioinformatics 23(2): 232-239 (2007)
23		Magesh Jayapandian, Adriane Chapman, V. Glenn Tarcea, Cong Yu, Aaron Elkiss, Angela Ianni, Bin Liu, Arnab Nandi, Carlos Santos, Philip Andrews, Brian D. Athey, David J. States, H. V. Jagadish: Michigan Molecular Interactions (MiMI): putting the jigsaw puzzle together. Nucleic Acids Research 35(Database-Issue): 566-571 (2007)
	2005
22		H. V. Jagadish, David J. States, Burkhard Rost: ISMB 2005. ISMB (Supplement of Bioinformatics) 2005: 1-2
21		H. V. Jagadish, David J. States, Burkhard Rost: ISMB 2005 Organization. ISMB (Supplement of Bioinformatics) 2005: 3-6
20		Carlos Santos, Daniela Eggle, David J. States: Wnt pathway curation using automated natural language processing: combining statistical methods with partial and full parse for knowledge extraction. Bioinformatics 21(8): 1653-1658 (2005)
	2001
19		David J. States, Volker Nowotny, Thomas W. Blackwell: Probabilistic approaches to the use of higher order clone relationships in physical map assembly. ISMB (Supplement of Bioinformatics) 2001: 262-269
18		David J. States: Time to defend what we have won Bioinformatics 17(4): 299 (2001)
17		Rongxiang Liu, Thomas W. Blackwell, David J. States: Conformational model for binding site recognition by the E.coli MetJ transcription factor. Bioinformatics 17(7): 622-633 (2001)
	2000
16		Zhengyan Kan, Warren Gish, Eric C. Rouchka, Jarret Glasscock, David J. States: UTR Reconstruction and Analysis Using Genomically Aligned EST Sequences. ISMB 2000: 218-227
	1999
15		Thomas W. Blackwell, Eric C. Rouchka, David J. States: Identity by Descent Genome Segmentation Based on Single Nucleotide Polymorphism Distributions. ISMB 1999: 54-59
	1998
14		Eric C. Rouchka, David J. States: Sequence Assembly Validation by Multiple Restriction Digest Fragment Coverage Analysis. ISMB 1998: 140-147
13		Rongxiang Liu, Thomas W. Blackwell, David J. States: A structure based similarity measure for nucleic acid sequence comparison. RECOMB 1998: 173-181
12		David G. Politte, David R. Maffitt, David J. States: Estimation of allele frequencies from color-multiplexed electropherograms. RECOMB 1998: 202-206
11		Pankaj Agarwal, David J. States: Comparative accuracy of methods for protein sequence similarity search. Bioinformatics 14(1): 40-47 (1998)
	1996
10		David J. States, Pankaj Agarwal, Terry Gaasterland, Lawrence Hunter, Randall Smith: Proceedings of the Fourth International Conference on Intelligent Systems for Molecular Biology, St. Louis, MO, USA, June 12-15 1996 AAAI 1996
9		David J. States, Pankaj Agarwal: Compact Encoding Strategies for DNA Sequence Similarity Search. ISMB 1996: 211-217
8		Pankaj Agarwal, David J. States: A Bayesian Evolutionary Distance for Parametrically Aligned Sequences. Journal of Computational Biology 3(1): 1-18 (1996)
	1994
7		Toni Kazic, David J. States, Lloyd Allison: Motifs in Biology: Analysis of Ambiguous Data: Introduction. HICSS (5) 1994: 224
6		Pankaj Agarwal, David J. States: The Repeat Pattern Toolkit (RPT): Analyzing the Structure and Evolution of the C. elegans Genome. ISMB 1994: 1-9
	1993
5		David J. States, Nomi L. Harris, Lawrence Hunter: Computationally Efficient Cluster Representation in Molecular Sequence Megaclassification. ISMB 1993: 387-394
4		Jean-Michel Claverie, David J. States: Information Enhancement Methods for Large Scale Sequence Analysis. Computers & Chemistry 17(2): 191-201 (1993)
	1992
3		Nomi L. Harris, Lawrence Hunter, David J. States: Mega-Classification: Discovering Motifs in Massive Datastreams. AAAI 1992: 837-842
2		Lawrence Hunter, Nomi L. Harris, David J. States: Efficient Classification of Massive, Unsegmented Datastreams. ML 1992: 224-232
1		Lawrence Hunter, David J. States: Bayesian Classification of Protein Structure. IEEE Expert 7(4): 67-75 (1992)

Coauthor Index

1	Alexander S. Ade	[27] [29] [30] [32]
2	Pankaj Agarwal	[6] [8] [9] [10] [11]
3	Lloyd Allison	[7]
4	Philip Andrews	[23]
5	Maital Ashkenazi	[28]
6	Brian D. Athey	[23] [27] [29] [30]
7	Gary D. Bader	[28]
8	Thomas W. Blackwell	[13] [15] [17] [19]
9	Aaron V. Bookvich	[29] [30]
10	Jim Cavalcoli	[29]
11	Adriane Chapman	[23] [29]
12	Jean-Michel Claverie	[4]
13	Daniela Eggle	[20]
14	Aaron Elkiss	[23] [25]
15	James Douglas Engel	[26]
16	Günes Erkan	[25]
17	Anthony Fader	[25]
18	Eva L. Feldman	[31]
19	Terry Gaasterland	[10]
20	Jing Gao	[29] [32]
21	Warren Gish	[16]
22	Jarret Glasscock	[16]
23	Nomi L. Harris	[2] [3] [5]
24	Alfred O. Hero III (Alfred O. Hero)	[26]
25	Lawrence Hunter	[1] [2] [3] [5] [10]
26	Junguk Hur	[31]
27	Angela Ianni	[23]
28	H. V. Jagadish	[21] [22] [23] [29] [32]
29	Magesh Jayapandian	[23] [29]
30	Zhengyan Kan	[16]
31	Toni Kazic	[7]
32	Allan Kuchinsky	[28]
33	Bin Liu	[23]
34	Rongxiang Liu	[13] [17]
35	David R. Maffitt	[12]
36	Vasudeva Mahavisno	[29]
37	Richard C. McEachin	[24]
38	Barbara Mirel (Barbara R. Mirel)	[29] [32]
39	Menachem Moshelion	[28]
40	Arnab Nandi	[23]
41	Volker Nowotny	[19]
42	Arzucan Özgür	[29]
43	Jignesh M. Patel	[24] [29]
44	David G. Politte	[12]
45	Dragomir R. Radev	[25] [29]
46	Arvind Rao	[26]
47	Burkhard Rost	[21] [22]
48	Eric C. Rouchka	[14] [15] [16]
49	Carlos Santos	[20] [23] [24]
50	Sirarat Sarntivijai	[27]
51	Adam D. Schuyler	[31]
52	Siwei Shen	[25]
53	Randall Smith	[10]
54	V. Glenn Tarcea	[23] [29] [32]
55	Yuanyuan Tian	[24] [29]
56	Terry E. Weymouth	[29] [32]
57	Zach Wright	[29]
58	Zachary C. Wright	[30]
59	Cong Yu	[23]

Colors in the list of coauthors