Dagstuhl Seminar Proceedings: Ontologies and Text Mining for Life Sciences 2008

• Johannes Schuchhardt:
  Systems biology approaches for prioritizing therapeutic gene targets.
  
• Dimitra Alexopoulou, Thomas Wächter, Laura Pickersgill, Cecilia Eyre, Michael Schroeder:
  Ontology learning with text mining: Two use cases in lipoprotein metabolism and toxicology.
  
• Elena Beisswanger, Michael Poprat, Udo Hahn:
  WordNet-Inspired Terminological Resources for Bio-NLP.
  
• Ted Briscoe, Caroline Gasperin, Ian Lewin, Andreas Vlachos:
  Bootstrapping an interactive information extraction system for FlyBase curation.
  
• Paul Buitelaar:
  Ontologies & Text Mining (for Life Sciences).
  
• Jörg Hakenberg:
  Services for annotation of biomedical text.
  
• Jung-Jae Kim:
  Ontology-based Extraction of Transcription Regulation Events.
  
• Michael Krauthammer, Thaibinh Luong:
  Term Mapping Using Matrix Operations.
  
• Ulf Leser, Philip Groth, Bertram Weiss, Hans-Dieter Pohlenz:
  Mining Phenotypes for Protein Function Prediction.
  
• N. Washington, M. Gibson, Chris Mungall, Michael Ashburner, G. Gkoutos, Monte Westerfield, Melissa Haendel, Suzanna E. Lewis:
  NLP and Phenotypes: using Ontologies to link Human Diseases to Animal Models.
  
• David Milward:
  Ontology-Based Interactive Information Extraction.
  
• Hans-Michael Müller, Arun Rangarajan, Tracy K. Teal, Kimberly Van Auken, Juancarlos Chan, Paul W. Sternberg:
  Textpresso - an Information Retrieval and Extraction System for Biological Literature.
  
• Jong C. Park:
  Text Mining and Management Tools for Resource Construction and Validation in the Life Sciences.
  
• Andreas Schlicker, Fidel Ramírez, Jörg Rahnenführer, Carola Huthmacher, Alejandro Pironti, Francisco S. Domingues, Thomas Lengauer, Mario Albrecht:
  Applications of semantic similarity measures.
  
• Heiko Dietze, Dimitra Alexopoulou, Michael R. Alvers, Bill Barrio-Alvers, Andreas Doms, Jörg Hakenberg, Jan Mönnich, Conrad Plake, Andreas Reischuk, Loïc Royer, Thomas Wächter, Matthias Zschunke, Michael Schroeder:
  GoPubMed: Exploring Pubmed with Ontological Background Knowledge.
  
• Stefan Schulz:
  Named Entity or Entity Name?.
  
• Jian Su, Xiaofeng Yang, Huaqing Hong, Yuka Tateisi, Jun-ichi Tsujii:
  Coreference Resolution in Biomedical Texts: a Machine Learning Approach.
  
• Michael Ashburner, Ulf Leser, Dietrich Rebholz-Schuhmann:
  08131 Executive Summary -- Ontologies and Text Mining for Life Sciences : Current Status and Future Perspectives.