2009 | ||
---|---|---|
20 | Paul Caravelli, Mitchell Beard, Brian Gopalan, Lisa Singh, Zhang-Zhi Hu: Generating Abstract Networks Using Multi-relational Biological Data. IV 2009: 331-336 | |
2008 | ||
19 | Guixian Xu, Lanlan Yin, Manabu Torii, Zhendong Niu, Cathy H. Wu, Zhang-Zhi Hu, Hongfang Liu: Document Classification for Mining Host Pathogen Protein-Protein Interactions. BIBM 2008: 461-466 | |
18 | Zhang-Zhi Hu, K. Bretonnel Cohen, Lynette Hirschman, Alfonso Valencia, Hongfang Liu, Michelle G. Giglio, Cathy H. Wu: iProLINK: A Framework for Linking Text Mining with Ontology and Systems Biology. BIBM 2008: 467-472 | |
17 | Katherine G. Herbert, Junilda Spirollari, Jason Tsong-Li Wang, William H. Piel, John D. Westbrook, Winona C. Barker, Zhang-Zhi Hu, Cathy H. Wu: Bioinformatic Databases. Wiley Encyclopedia of Computer Science and Engineering 2008 | |
2007 | ||
16 | Hongfang Liu, Manabu Torii, Zhang-Zhi Hu, Cathy H. Wu: Mapping Gene/Protein Names in Free Text to Biomedical Databases. ICDM Workshops 2007: 101-106 | |
15 | Manabu Torii, Zhang-Zhi Hu, Min Song, Cathy H. Wu, Hongfang Liu: A comparison study on algorithms of detecting long forms for short forms in biomedical text. BMC Bioinformatics 8(S-9): (2007) | |
14 | Darren A. Natale, Cecilia N. Arighi, Winona C. Barker, Judith A. Blake, Ti-Cheng Chang, Zhang-Zhi Hu, Hongfang Liu, Barry Smith, Cathy H. Wu: Framework for a Protein Ontology. BMC Bioinformatics 8(S-9): (2007) | |
13 | Peng Qiu, Z. Jane Wang, K. J. Ray Liu, Zhang-Zhi Hu, Cathy H. Wu: Dependence network modeling for biomarker identification. Bioinformatics 23(2): 198-206 (2007) | |
2006 | ||
12 | Hongfang Liu, Zhang-Zhi Hu, Jian Zhang, Cathy H. Wu: BioThesaurus: a web-based thesaurus of protein and gene names. Bioinformatics 22(1): 103-105 (2006) | |
11 | X. Yuan, Zhang-Zhi Hu, H. T. Wu, Manabu Torii, Meenakshi Narayanaswamy, K. E. Ravikumar, K. Vijay-Shanker, Cathy H. Wu: An online literature mining tool for protein phosphorylation. Bioinformatics 22(13): 1668-1669 (2006) | |
10 | Bo Han, Zoran Obradovic, Zhang-Zhi Hu, Cathy H. Wu, Slobodan Vucetic: Substring selection for biomedical document classification. Bioinformatics 22(17): 2136-2142 (2006) | |
2005 | ||
9 | Hongfang Liu, Zhang-Zhi Hu, Cathy H. Wu: Dynamically Generating a Protein Entity Dictionary Using Online Resources. ACL 2005 | |
8 | Hongfang Liu, Zhang-Zhi Hu, Cathy H. Wu: DynGO: a tool for visualizing and mining of Gene Ontology and its associations. BMC Bioinformatics 6: 201 (2005) | |
7 | Zhang-Zhi Hu, Meenakshi Narayanaswamy, K. E. Ravikumar, K. Vijay-Shanker, Cathy H. Wu: Literature mining and database annotation of protein phosphorylation using a rule-based system. Bioinformatics 21(11): 2759-2765 (2005) | |
2004 | ||
6 | Cathy H. Wu, Hongzhan Huang, Anastasia N. Nikolskaya, Zhang-Zhi Hu, Winona C. Barker: The iProClass integrated database for protein functional analysis. Computational Biology and Chemistry 28(1): 87-96 (2004) | |
5 | Zhang-Zhi Hu, Inderjeet Mani, Vincent Hermoso, Hongfang Liu, Cathy H. Wu: iProLINK: an integrated protein resource for literature mining. Computational Biology and Chemistry 28(5-6): 409-416 (2004) | |
4 | Hongzhan Huang, Zhang-Zhi Hu, Baris E. Suzek, Cathy H. Wu: The PIR integrated protein databases and data retrieval system. Data Science Journal 3: 163-174 (2004) | |
3 | Cathy H. Wu, Anastasia N. Nikolskaya, Hongzhan Huang, Lai-Su L. Yeh, Darren A. Natale, C. R. Vinayaka, Zhang-Zhi Hu, Raja Mazumder, Sandeep Kumar, Panagiotis Kourtesis, Robert S. Ledley, Baris E. Suzek, Leslie Arminski, Yongxing Chen, Jian Zhang, Jorge Louie Cardenas, Sehee Chung, Jorge Castro-Alvear, Georgi Dinkov, Winona C. Barker: PIRSF: family classification system at the Protein Information Resource. Nucleic Acids Research 32(Database-Issue): 112-114 (2004) | |
2003 | ||
2 | Cathy H. Wu, Lai-Su L. Yeh, Hongzhan Huang, Leslie Arminski, Jorge Castro-Alvear, Yongxing Chen, Zhang-Zhi Hu, Panagiotis Kourtesis, Robert S. Ledley, Baris E. Suzek, C. R. Vinayaka, Jian Zhang, Winona C. Barker: The Protein Information Resource. Nucleic Acids Research 31(1): 345-347 (2003) | |
2002 | ||
1 | Cathy H. Wu, Hongzhan Huang, Leslie Arminski, Jorge Castro-Alvear, Yongxing Chen, Zhang-Zhi Hu, Robert S. Ledley, Kali C. Lewis, Hans-Werner Mewes, Bruce C. Orcutt, Baris E. Suzek, Akira Tsugita, C. R. Vinayaka, Lai-Su L. Yeh, Jian Zhang, Winona C. Barker: The Protein Information Resource: an integrated public resource of functional annotation of proteins. Nucleic Acids Research 30(1): 35-37 (2002) |